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For Online Sellers, Marketplace Operators & E-Commerce Businesses

GST on E-Commerce in India

GST on e-commerce is mandatory for every online seller, marketplace operator, and digital service provider operating in India. Whether you sell on Amazon, Flipkart, Meesho, or your own website, understanding and filing GST on e-commerce correctly helps you avoid TCS mismatches, penalty notices, and compliance failures. Tax Robo’s expert CA team manages your complete GST on e-commerce filing — 100% online, no office visit needed. Starting at ₹4,999 per month.

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Service Overview

What is a GST on E-Commerce Return Filing?

GST on e-commerce refers to the goods and services tax applicable to businesses that sell products or services through online platforms and digital marketplaces in India. Under the GST regime, e-commerce sellers are treated differently from regular businesses — goods sellers on online platforms must register for GST regardless of turnover, and marketplace operators like Amazon and Flipkart must collect TCS (Tax Collected at Source) at 0.5% on every transaction and deposit it with the government.


For online sellers, GST on e-commerce compliance involves monthly GSTR-1 and GSTR-3B filing, reconciling TCS deducted by the marketplace with GSTR-2B, and ensuring all sales across all platforms are reported correctly. Tax Robo’s CA team handles the complete end-to-end GST on e-commerce filing for individual sellers, partnership firms, private limited companies, LLPs, and all other business types selling online.

  • GST registration mandatory for goods sellers on e-commerce platforms — normal ₹40 lakh threshold does not apply
  • Marketplace operators collect 0.5% TCS on every sale — must be reconciled in GSTR-2B monthly
  • File GSTR-1 and GSTR-3B every month covering all platforms and sales channels
  • TCS credit auto-appears in GSTR-2B — must match your actual sales data every month

Key Benefits

Why choose a GST on E-Commerce return filing service?

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TCS reconciliation done right

TCS deducted by Amazon, Flipkart, and Meesho must match your GSTR-2B every month. Our CAs reconcile TCS credits accurately so you never overpay or underclaim.

Multi-platform GST filing

Selling on multiple platforms? We consolidate sales data from all channels — Amazon, Flipkart, own website — into one accurate monthly return without missing a single invoice.

CA-certified monthly filing

Every GSTR-1 and GSTR-3B is prepared and reviewed by a certified CA. Accurate, on time, and fully compliant with GST portal requirements every month.

How It Works

Simple Process —GST on e-commerce Return Filing

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Get your GST on e-commerce return filed correctly in 3 easy steps

Share your sales data & platform reports

Step 1

Send us your monthly sales reports from Amazon, Flipkart, Meesho, or your website along with purchase invoices via WhatsApp or email.

CA reconciles TCS & prepares returns

Step 2

Our CA reconciles TCS from each marketplace with GSTR-2B
and prepares GSTR-1 and GSTR-3B accurately for your
approval before filing.

Returns filed & acknowledgement shared

Step 3

After your approval, we file on the GST portal before the due date. Your ARN acknowledgement is shared immediately — your monthly compliance is complete.

* Note: Returns filed before the 11th (GSTR-1) and 20th (GSTR-3B) of every month.

Pricing Plans

Simple & Transparent Pricing

All plans include CA-reviewed GSTR-1 and GSTR-3B filing, TCS reconciliation, and free GST consulting.

*Note: All prices exclude GST. No hidden charges.
Government GST tax payment is the client’s responsibility
and is not included in the subscription fee.

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Documents Checklist

Documents Required for Filing

NOTE :

These Documents Must Be Submitted Before Filing. Tax Robo Verifies All Documents Before Submission.

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Platform Sales Data

✓ Monthly sales report from Amazon / Flipkart / Meesho
✓ Sales report from own website or other platforms
✓ B2B and B2C sales breakup for the month
✓ Credit notes and cancellations / returns data

Business & GST Details

✓ GSTIN of the business
✓ GST login credentials
✓ Previous month's filed GSTR-1 and GSTR-3B
✓ GST payment challan details

Purchase & ITC Data

✓ Purchase invoices from all suppliers
✓ ITC claimed this month in GSTR-3B
✓ TCS certificate from each marketplace platform
✓ RCM transactions (if applicable)

Business & Tax Details

✓ PAN card of business owner
✓ Bank statement for the month
✓ GSTR-2B auto-drafted statement
✓ Any GST notices received (if any)

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Common Questions

Frequently Asked Questions — GST on e-commerce return filing

Find answers to frequently asked questions about GST on
e-commerce return filing in India.

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GST on e-commerce is the goods and services tax applicable to businesses that sell products or services through online platforms and digital marketplaces in India. Goods sellers on e-commerce platforms must register for GST regardless of turnover — the normal ₹40 lakh threshold does not apply to them. Service providers selling through platforms can avail the regular ₹20 lakh threshold. Once registered, you must file GSTR-1 and GSTR-3B every month on the GST portal, reporting all sales across all channels.

TCS stands for Tax Collected at Source. Under GST, every e-commerce marketplace operator — Amazon, Flipkart, Meesho, Swiggy, Zomato, and others — is required to deduct TCS at 0.5% (0.25% CGST + 0.25% SGST) on the net taxable value of every sale made through their platform. This rate was reduced from 1% to 0.5% effective 10 July 2024 via CBIC Notification No. 15/2024. The TCS is deposited with the government on your behalf and reflects in your GSTR-2B every month. You can claim this as a credit in your GSTR-3B to reduce your net GST payable. Tax Robo reconciles TCS from every platform with your GSTR-2B to ensure you claim every eligible credit accurately.

GSTR-1 is the outward supply return filed by the 11th of every month — you report all sales invoices raised to customers across all platforms during the previous month. GSTR-3B is the monthly summary return filed by the 20th — you report total GST liability, claim TCS credits and input tax credits, and pay the net GST due. For e-commerce sellers with multiple platforms, GSTR-1 must consolidate all channel sales accurately before filing. Tax Robo prepares and files both GSTR-1 and GSTR-3B as part of every plan.

Yes — GST for e-commerce sellers in India who sell goods is mandatory regardless of annual turnover. This is different from regular businesses where registration is needed only above ₹40 lakhs. If you sell goods through any online marketplace — Amazon, Flipkart, Meesho, Nykaa, or any other platform — you must obtain GST registration before making your first sale. An exception applies for eligible small intra-state goods sellers below the threshold limit since October 2023, but this has conditions. Service providers selling through platforms follow the regular ₹20 lakh threshold. Tax Robo can advise whether your specific business qualifies for an exemption.

GST on e-commerce operators like Amazon, Flipkart, and Meesho have three main obligations under GST law. First, they must collect TCS at 0.5% on the net value of every taxable sale made through their platform. Second, they must deposit this TCS with the government by the 10th of the following month. Third, they must file GSTR-8 every month by the 10th reporting all transactions and TCS deducted. As a seller, this TCS automatically appears in your GSTR-2B and can be claimed as a credit. Tax Robo ensures your GSTR-2B TCS credits are fully reconciled with your actual sales every month.

TCS under GST for e-commerce applies separately on each platform you sell through. If you sell on both Amazon and Flipkart, each platform deducts 0.5% TCS on their respective sales and deposits it separately. Both TCS amounts appear in your consolidated GSTR-2B every month. During GSTR-3B filing, you claim the total TCS from all platforms as a single credit against your GST liability. If TCS credit exceeds your liability for the month, the excess can be carried forward or claimed as a refund. Tax Robo tracks TCS from every platform separately to ensure accurate reconciliation and full credit utilisation.

GST return filing for online sellers with their own website works differently from marketplace sellers. If you sell directly through your own website — Shopify, WooCommerce, or a custom store — there is no TCS deduction since you are not selling through a marketplace operator. However, you must register for GST if your turnover crosses ₹20 lakhs for services (₹40 lakhs for goods) and file monthly GSTR-1 and GSTR-3B. If you sell through both a marketplace and your own website, all sales must be consolidated in a single GSTR-1 filing each month. Tax Robo handles both marketplace and direct website GST filing under one engagement.

Missing the GST return due date attracts a late fee of ₹50 per day (₹25 CGST + ₹25 SGST) for returns with tax liability, subject to a maximum of ₹5,000 per return. For nil returns the late fee is ₹20 per day. Interest at 18% per annum is charged on any unpaid GST from the due date of filing. For e-commerce sellers, repeated late filing can also affect your seller account status on marketplace platforms — some platforms monitor GST compliance and may flag non-compliant sellers. Tax Robo tracks all due dates and files your GSTR-1 and GSTR-3B before the deadline every single month without exception.

Still have questions? Our experts are here to help you choose the right service for your business.

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Ready to complete your GST on e-commerce return filing ?

Talk to one of our CAs today — free consultation, no obligations. We will help you  GST on e-commerce return filing quickly and correctly.

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